PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00023.1.g00380.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Dof
Protein Properties Length: 369aa    MW: 37204 Da    PI: 8.6883
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00023.1.g00380.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.34.1e-3973133262
                          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                                     kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ s
  Zjn_sc00023.1.g00380.1.sm.mkhc  73 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPS 133
                                     7899******************************************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-3071131IPR003851Zinc finger, Dof-type
PfamPF027013.1E-3375131IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.05977131IPR003851Zinc finger, Dof-type
PROSITE patternPS01361079115IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MDAAHWHQGL GLVKPMEDML MATNAAAANP SQGSAANPPA PAPSSTPGSA LRGGAPAAVA  60
GAGSAERRVR PQKEKALNCP RCNSTNTKFC YYNNYSLQQP RYFCKTCRRY WTEGGSLRNV  120
PVGGGSRKNK RPSSSSASAS TSASITSSSM VSSAGVASKN PKLTQDGAQD LNLAFPHYGG  180
LKAPVDFAAF PSLESSSVGG ATTSNGRGGS SGSAVGAISA MELLRSTGYY MPLQVPMQMP  240
GDYAAAGFSF GEFRAPPPPP PPSQNVFGFS LDAHGSAAGA AAAGYGSGTG LPGAPENASR  300
LLFPFEDLKP PVSSGGGDGA GGASVGPGDE NSGHHQFEHG KEQGGGGPGA GHDTPGFWNS  360
MSGGSGTSW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001150043.11e-142dof zinc finger protein
TrEMBLA0A0A9GUS71e-155A0A0A9GUS7_ARUDO; Uncharacterized protein
STRINGMLOC_68844.21e-131(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23693486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.12e-37Dof family protein